Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ShdO88834 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ShdO88834 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
ShdO88834 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.37■□□□□ 0.37
ShdO88834 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ShdO88834 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ShdO88834 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.37■□□□□ 0.37
ShdO88834 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Il3ra-202ENSMUST00000223589 738 ntBASIC17.37■□□□□ 0.37
ShdO88834 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.37■□□□□ 0.37
ShdO88834 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.37■□□□□ 0.37
ShdO88834 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ShdO88834 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ShdO88834 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.36■□□□□ 0.37
ShdO88834 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.36■□□□□ 0.37
ShdO88834 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.36■□□□□ 0.37
ShdO88834 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ShdO88834 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ShdO88834 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ShdO88834 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.35■□□□□ 0.37
ShdO88834 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ShdO88834 Mir7071-201ENSMUST00000184847 69 ntBASIC17.35■□□□□ 0.37
ShdO88834 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.35■□□□□ 0.37
ShdO88834 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.35■□□□□ 0.37
ShdO88834 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ShdO88834 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShdO88834 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ShdO88834 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.34■□□□□ 0.37
ShdO88834 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ShdO88834 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.34■□□□□ 0.37
ShdO88834 Gm27000-201ENSMUST00000182943 842 ntBASIC17.34■□□□□ 0.37
ShdO88834 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.34■□□□□ 0.37
ShdO88834 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms