Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.58■□□□□ 0.24
ClppO88696 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ClppO88696 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ClppO88696 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ClppO88696 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Gm29791-202ENSMUST00000207888 369 ntBASIC16.57■□□□□ 0.24
ClppO88696 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.57■□□□□ 0.24
ClppO88696 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.57■□□□□ 0.24
ClppO88696 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClppO88696 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Gm13474-201ENSMUST00000122466 815 ntBASIC16.56■□□□□ 0.24
ClppO88696 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Gm24841-201ENSMUST00000158676 357 ntBASIC16.56■□□□□ 0.24
ClppO88696 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ClppO88696 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Mir5130-201ENSMUST00000175160 84 ntBASIC16.56■□□□□ 0.24
ClppO88696 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ClppO88696 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.56■□□□□ 0.24
ClppO88696 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ClppO88696 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClppO88696 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ClppO88696 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.55■□□□□ 0.24
ClppO88696 Gm16061-201ENSMUST00000122167 857 ntBASIC16.55■□□□□ 0.24
ClppO88696 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.55■□□□□ 0.24
ClppO88696 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.55■□□□□ 0.24
ClppO88696 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.55■□□□□ 0.24
ClppO88696 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClppO88696 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
ClppO88696 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ClppO88696 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.54■□□□□ 0.24
ClppO88696 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ClppO88696 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClppO88696 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
ClppO88696 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ClppO88696 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.54■□□□□ 0.24
ClppO88696 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ClppO88696 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ClppO88696 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ClppO88696 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ClppO88696 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.53■□□□□ 0.24
ClppO88696 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ClppO88696 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ClppO88696 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.53■□□□□ 0.24
ClppO88696 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClppO88696 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms