Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a20bO88575 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.53■□□□□ 0.56
Slc6a20bO88575 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a20bO88575 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.52■□□□□ 0.56
Slc6a20bO88575 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.52■□□□□ 0.56
Slc6a20bO88575 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a20bO88575 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Slc6a20bO88575 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a20bO88575 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a20bO88575 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Gm27702-201ENSMUST00000184512 56 ntBASIC18.51■□□□□ 0.55
Slc6a20bO88575 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.51■□□□□ 0.55
Slc6a20bO88575 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a20bO88575 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Gm44450-201ENSMUST00000199528 114 ntBASIC18.5■□□□□ 0.55
Slc6a20bO88575 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a20bO88575 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Gm15165-201ENSMUST00000118140 502 ntBASIC18.49■□□□□ 0.55
Slc6a20bO88575 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Gm43575-201ENSMUST00000196420 516 ntBASIC18.49■□□□□ 0.55
Slc6a20bO88575 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Slc6a20bO88575 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.48■□□□□ 0.55
Slc6a20bO88575 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a20bO88575 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms