Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lrp6O88572 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Gm13616-201ENSMUST00000120600 222 ntBASIC22.06■■□□□ 1.12
Lrp6O88572 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrp6O88572 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.06■■□□□ 1.12
Lrp6O88572 AC139382.1-201ENSMUST00000221402 498 ntBASIC22.06■■□□□ 1.12
Lrp6O88572 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrp6O88572 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Lrp6O88572 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC22.06■■□□□ 1.12
Lrp6O88572 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lrp6O88572 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Lrp6O88572 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Lrp6O88572 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC22.06■■□□□ 1.12
Lrp6O88572 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Lrp6O88572 Mir8117-201ENSMUST00000184773 107 ntBASIC22.06■■□□□ 1.12
Lrp6O88572 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrp6O88572 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Lrp6O88572 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrp6O88572 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrp6O88572 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrp6O88572 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Lrp6O88572 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrp6O88572 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrp6O88572 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Gm11780-201ENSMUST00000136880 516 ntBASIC22.04■■□□□ 1.12
Lrp6O88572 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC22.04■■□□□ 1.12
Lrp6O88572 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC22.04■■□□□ 1.12
Lrp6O88572 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Gm5745-201ENSMUST00000183748 313 ntBASIC22.04■■□□□ 1.12
Lrp6O88572 Gm37171-201ENSMUST00000192636 1185 ntBASIC22.04■■□□□ 1.12
Lrp6O88572 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Lrp6O88572 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrp6O88572 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC22.03■■□□□ 1.12
Lrp6O88572 AC174742.1-201ENSMUST00000218272 304 ntBASIC22.03■■□□□ 1.12
Lrp6O88572 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.03■■□□□ 1.12
Lrp6O88572 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Lrp6O88572 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrp6O88572 AC154757.1-201ENSMUST00000228289 336 ntBASIC22.02■■□□□ 1.12
Lrp6O88572 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC22.02■■□□□ 1.12
Lrp6O88572 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Lrp6O88572 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
Lrp6O88572 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrp6O88572 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrp6O88572 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrp6O88572 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Lrp6O88572 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Lrp6O88572 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.11
Lrp6O88572 AC124549.3-201ENSMUST00000225541 367 ntBASIC22.02■■□□□ 1.11
Lrp6O88572 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lrp6O88572 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
Lrp6O88572 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lrp6O88572 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
Lrp6O88572 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC22.01■■□□□ 1.11
Lrp6O88572 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC22.01■■□□□ 1.11
Lrp6O88572 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 AA543401-201ENSMUST00000164248 1269 ntBASIC22.01■■□□□ 1.11
Lrp6O88572 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.01■■□□□ 1.11
Lrp6O88572 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Gm44430-201ENSMUST00000203376 995 ntBASIC22.01■■□□□ 1.11
Lrp6O88572 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrp6O88572 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrp6O88572 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC22■■□□□ 1.11
Lrp6O88572 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Lrp6O88572 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lrp6O88572 Gm43272-201ENSMUST00000200599 1584 ntBASIC22■■□□□ 1.11
Lrp6O88572 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22■■□□□ 1.11
Lrp6O88572 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrp6O88572 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms