Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cops6O88545 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.77■□□□□ 0.92
Cops6O88545 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cops6O88545 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cops6O88545 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.76■□□□□ 0.91
Cops6O88545 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Gm44450-201ENSMUST00000199528 114 ntBASIC20.76■□□□□ 0.91
Cops6O88545 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cops6O88545 Gm7461-201ENSMUST00000058918 827 ntBASIC20.76■□□□□ 0.91
Cops6O88545 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.76■□□□□ 0.91
Cops6O88545 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Cops6O88545 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cops6O88545 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.75■□□□□ 0.91
Cops6O88545 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.75■□□□□ 0.91
Cops6O88545 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.75■□□□□ 0.91
Cops6O88545 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops6O88545 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cops6O88545 Gm24589-201ENSMUST00000116692 94 ntBASIC20.74■□□□□ 0.91
Cops6O88545 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.74■□□□□ 0.91
Cops6O88545 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops6O88545 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cops6O88545 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cops6O88545 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.73■□□□□ 0.91
Cops6O88545 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cops6O88545 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.73■□□□□ 0.91
Cops6O88545 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops6O88545 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Cops6O88545 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.73■□□□□ 0.91
Cops6O88545 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cops6O88545 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cops6O88545 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.72■□□□□ 0.91
Cops6O88545 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.72■□□□□ 0.91
Cops6O88545 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.72■□□□□ 0.91
Cops6O88545 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cops6O88545 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.72■□□□□ 0.91
Cops6O88545 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.72■□□□□ 0.91
Cops6O88545 Gm8969-201ENSMUST00000199694 526 ntBASIC20.72■□□□□ 0.91
Cops6O88545 Gm34391-201ENSMUST00000203706 907 ntBASIC20.72■□□□□ 0.91
Cops6O88545 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.72■□□□□ 0.91
Cops6O88545 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Cops6O88545 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Cops6O88545 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops6O88545 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cops6O88545 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.71■□□□□ 0.91
Cops6O88545 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.71■□□□□ 0.91
Cops6O88545 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cops6O88545 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.71■□□□□ 0.91
Cops6O88545 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cops6O88545 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cops6O88545 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.7■□□□□ 0.9
Cops6O88545 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.7■□□□□ 0.9
Cops6O88545 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Cops6O88545 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.7■□□□□ 0.9
Cops6O88545 Gm18421-201ENSMUST00000204122 625 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms