Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cacna1hO88427 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.55■□□□□ 0.24
Cacna1hO88427 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cacna1hO88427 Tgds-204ENSMUST00000228543 1594 ntBASIC16.54■□□□□ 0.24
Cacna1hO88427 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cacna1hO88427 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Cacna1hO88427 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.54■□□□□ 0.24
Cacna1hO88427 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cacna1hO88427 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Mir7023-201ENSMUST00000185093 64 ntBASIC16.54■□□□□ 0.24
Cacna1hO88427 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.54■□□□□ 0.24
Cacna1hO88427 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1hO88427 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.53■□□□□ 0.24
Cacna1hO88427 Gm44430-201ENSMUST00000203376 995 ntBASIC16.53■□□□□ 0.24
Cacna1hO88427 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.53■□□□□ 0.24
Cacna1hO88427 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cacna1hO88427 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Gm13616-201ENSMUST00000120600 222 ntBASIC16.53■□□□□ 0.24
Cacna1hO88427 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.53■□□□□ 0.24
Cacna1hO88427 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Cacna1hO88427 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1hO88427 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.52■□□□□ 0.24
Cacna1hO88427 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cacna1hO88427 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.52■□□□□ 0.24
Cacna1hO88427 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1hO88427 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.52■□□□□ 0.23
Cacna1hO88427 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.52■□□□□ 0.23
Cacna1hO88427 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.52■□□□□ 0.23
Cacna1hO88427 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1hO88427 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.52■□□□□ 0.23
Cacna1hO88427 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Mir8117-201ENSMUST00000184773 107 ntBASIC16.51■□□□□ 0.23
Cacna1hO88427 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.51■□□□□ 0.23
Cacna1hO88427 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.51■□□□□ 0.23
Cacna1hO88427 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1hO88427 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.5■□□□□ 0.23
Cacna1hO88427 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1hO88427 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1hO88427 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms