Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Col5a1O88207 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col5a1O88207 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col5a1O88207 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.33■□□□□ 0.04
Col5a1O88207 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.33■□□□□ 0.04
Col5a1O88207 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col5a1O88207 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.33■□□□□ 0.04
Col5a1O88207 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.33■□□□□ 0.04
Col5a1O88207 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Col5a1O88207 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col5a1O88207 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.32■□□□□ 0.04
Col5a1O88207 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.32■□□□□ 0.04
Col5a1O88207 Mir5126-201ENSMUST00000175513 77 ntBASIC15.32■□□□□ 0.04
Col5a1O88207 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.32■□□□□ 0.04
Col5a1O88207 Gm44450-201ENSMUST00000199528 114 ntBASIC15.32■□□□□ 0.04
Col5a1O88207 Gm5364-201ENSMUST00000216789 889 ntBASIC15.32■□□□□ 0.04
Col5a1O88207 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col5a1O88207 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col5a1O88207 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col5a1O88207 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Gm23935-201ENSMUST00000102303 57 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm24270-201ENSMUST00000102326 57 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm24245-201ENSMUST00000157318 57 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col5a1O88207 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Phf7-203ENSMUST00000226565 1971 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
Col5a1O88207 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.31■□□□□ 0.04
Col5a1O88207 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Col5a1O88207 Auts2-212ENSMUST00000178555 309 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm5264-201ENSMUST00000190584 848 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44357-201ENSMUST00000195897 142 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm19658-201ENSMUST00000196231 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44367-201ENSMUST00000196836 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44350-201ENSMUST00000197197 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44390-201ENSMUST00000197533 144 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44313-201ENSMUST00000198018 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44486-201ENSMUST00000198508 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44454-201ENSMUST00000198541 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44314-201ENSMUST00000199263 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44394-201ENSMUST00000199558 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44484-201ENSMUST00000199873 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44466-201ENSMUST00000200264 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Gm44359-201ENSMUST00000200671 138 ntBASIC15.31■□□□□ 0.04
Col5a1O88207 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col5a1O88207 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col5a1O88207 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Col5a1O88207 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
Col5a1O88207 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col5a1O88207 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.3■□□□□ 0.04
Col5a1O88207 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Gm12644-201ENSMUST00000119935 606 ntBASIC15.3■□□□□ 0.04
Col5a1O88207 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col5a1O88207 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col5a1O88207 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a1O88207 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.29■□□□□ 0.04
Col5a1O88207 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col5a1O88207 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.29■□□□□ 0.04
Col5a1O88207 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.29■□□□□ 0.04
Col5a1O88207 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col5a1O88207 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.29■□□□□ 0.04
Col5a1O88207 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a1O88207 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col5a1O88207 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col5a1O88207 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms