Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Gm15442-201ENSMUST00000117905 1527 ntBASIC22.06■■□□□ 1.12
Ubr1O70481 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Ubr1O70481 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC22.05■■□□□ 1.12
Ubr1O70481 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.05■■□□□ 1.12
Ubr1O70481 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Gm15165-201ENSMUST00000118140 502 ntBASIC22.05■■□□□ 1.12
Ubr1O70481 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.05■■□□□ 1.12
Ubr1O70481 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.05■■□□□ 1.12
Ubr1O70481 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.05■■□□□ 1.12
Ubr1O70481 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.05■■□□□ 1.12
Ubr1O70481 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.05■■□□□ 1.12
Ubr1O70481 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr1O70481 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Ubr1O70481 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC22.04■■□□□ 1.12
Ubr1O70481 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ubr1O70481 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC22.04■■□□□ 1.12
Ubr1O70481 Gm11452-201ENSMUST00000122376 690 ntBASIC22.04■■□□□ 1.12
Ubr1O70481 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ubr1O70481 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Gm18733-201ENSMUST00000173950 856 ntBASIC22.03■■□□□ 1.12
Ubr1O70481 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ubr1O70481 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Ubr1O70481 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Ubr1O70481 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC22.03■■□□□ 1.12
Ubr1O70481 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ubr1O70481 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubr1O70481 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.03■■□□□ 1.12
Ubr1O70481 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Ubr1O70481 Mir5126-201ENSMUST00000175513 77 ntBASIC22.02■■□□□ 1.12
Ubr1O70481 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubr1O70481 Gm5712-201ENSMUST00000199748 1043 ntBASIC22.02■■□□□ 1.11
Ubr1O70481 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC22.02■■□□□ 1.11
Ubr1O70481 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ubr1O70481 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ubr1O70481 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.01■■□□□ 1.11
Ubr1O70481 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC22.01■■□□□ 1.11
Ubr1O70481 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ubr1O70481 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC22.01■■□□□ 1.11
Ubr1O70481 Gm2651-201ENSMUST00000203560 838 ntBASIC22.01■■□□□ 1.11
Ubr1O70481 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Ubr1O70481 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC22.01■■□□□ 1.11
Ubr1O70481 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubr1O70481 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ubr1O70481 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC22■■□□□ 1.11
Ubr1O70481 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ubr1O70481 Gm37519-201ENSMUST00000191687 2210 ntBASIC22■■□□□ 1.11
Ubr1O70481 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22■■□□□ 1.11
Ubr1O70481 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms