Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim1O70400 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim1O70400 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.77■□□□□ 0.28
Pdlim1O70400 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.77■□□□□ 0.28
Pdlim1O70400 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Gm9987-201ENSMUST00000069768 567 ntBASIC16.77■□□□□ 0.28
Pdlim1O70400 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim1O70400 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim1O70400 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim1O70400 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim1O70400 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.76■□□□□ 0.27
Pdlim1O70400 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim1O70400 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.76■□□□□ 0.27
Pdlim1O70400 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.75■□□□□ 0.27
Pdlim1O70400 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.75■□□□□ 0.27
Pdlim1O70400 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Mir1668-201ENSMUST00000184114 107 ntBASIC16.75■□□□□ 0.27
Pdlim1O70400 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.75■□□□□ 0.27
Pdlim1O70400 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim1O70400 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.74■□□□□ 0.27
Pdlim1O70400 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim1O70400 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim1O70400 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms