Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Gm13148-201ENSMUST00000118892 745 ntBASIC15.44■□□□□ 0.06
Pdlim3O70209 Gm6576-201ENSMUST00000169678 883 ntBASIC15.44■□□□□ 0.06
Pdlim3O70209 Gm10138-203ENSMUST00000206952 366 ntBASIC15.44■□□□□ 0.06
Pdlim3O70209 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pdlim3O70209 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.44■□□□□ 0.06
Pdlim3O70209 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.43■□□□□ 0.06
Pdlim3O70209 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pdlim3O70209 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gm10849-201ENSMUST00000100397 618 ntBASIC15.43■□□□□ 0.06
Pdlim3O70209 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pdlim3O70209 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.43■□□□□ 0.06
Pdlim3O70209 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pdlim3O70209 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Gm26571-201ENSMUST00000181399 666 ntBASIC15.42■□□□□ 0.06
Pdlim3O70209 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.42■□□□□ 0.06
Pdlim3O70209 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim3O70209 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pdlim3O70209 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.41■□□□□ 0.06
Pdlim3O70209 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.41■□□□□ 0.06
Pdlim3O70209 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.41■□□□□ 0.06
Pdlim3O70209 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim3O70209 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms