Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Top3aO70157 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Top3aO70157 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top3aO70157 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Top3aO70157 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Top3aO70157 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Top3aO70157 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.12■□□□□ 0.33
Top3aO70157 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Top3aO70157 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Top3aO70157 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top3aO70157 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.11■□□□□ 0.33
Top3aO70157 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Top3aO70157 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.11■□□□□ 0.33
Top3aO70157 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Top3aO70157 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top3aO70157 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.1■□□□□ 0.33
Top3aO70157 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.1■□□□□ 0.33
Top3aO70157 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.1■□□□□ 0.33
Top3aO70157 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.1■□□□□ 0.33
Top3aO70157 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.1■□□□□ 0.33
Top3aO70157 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top3aO70157 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Top3aO70157 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.09■□□□□ 0.33
Top3aO70157 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.09■□□□□ 0.33
Top3aO70157 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.09■□□□□ 0.33
Top3aO70157 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Top3aO70157 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.09■□□□□ 0.33
Top3aO70157 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top3aO70157 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Top3aO70157 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Top3aO70157 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Top3aO70157 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Top3aO70157 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Top3aO70157 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Top3aO70157 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Top3aO70157 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Top3aO70157 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms