Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rdh5O55240 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Rdh5O55240 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rdh5O55240 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.11■□□□□ 0.17
Rdh5O55240 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.11■□□□□ 0.17
Rdh5O55240 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.11■□□□□ 0.17
Rdh5O55240 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rdh5O55240 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rdh5O55240 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rdh5O55240 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.1■□□□□ 0.17
Rdh5O55240 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Gm7638-201ENSMUST00000121348 967 ntBASIC16.1■□□□□ 0.17
Rdh5O55240 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.1■□□□□ 0.17
Rdh5O55240 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Rdh5O55240 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.1■□□□□ 0.17
Rdh5O55240 Gm9731-201ENSMUST00000209480 747 ntBASIC16.1■□□□□ 0.17
Rdh5O55240 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.1■□□□□ 0.17
Rdh5O55240 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
Rdh5O55240 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rdh5O55240 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Rdh5O55240 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rdh5O55240 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rdh5O55240 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rdh5O55240 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.09■□□□□ 0.17
Rdh5O55240 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.09■□□□□ 0.17
Rdh5O55240 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.09■□□□□ 0.17
Rdh5O55240 Mir5122-201ENSMUST00000175004 89 ntBASIC16.09■□□□□ 0.17
Rdh5O55240 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.09■□□□□ 0.17
Rdh5O55240 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rdh5O55240 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rdh5O55240 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rdh5O55240 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rdh5O55240 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rdh5O55240 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rdh5O55240 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rdh5O55240 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Gm15565-201ENSMUST00000118890 427 ntBASIC16.08■□□□□ 0.16
Rdh5O55240 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Rdh5O55240 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rdh5O55240 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rdh5O55240 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rdh5O55240 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms