Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.74■□□□□ 0.59
Prom1O54990 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.74■□□□□ 0.59
Prom1O54990 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.74■□□□□ 0.59
Prom1O54990 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.73■□□□□ 0.59
Prom1O54990 Gm27459-201ENSMUST00000184860 107 ntBASIC18.73■□□□□ 0.59
Prom1O54990 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.73■□□□□ 0.59
Prom1O54990 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.73■□□□□ 0.59
Prom1O54990 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prom1O54990 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.72■□□□□ 0.59
Prom1O54990 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prom1O54990 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Prom1O54990 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.72■□□□□ 0.59
Prom1O54990 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.72■□□□□ 0.59
Prom1O54990 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Prom1O54990 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prom1O54990 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.72■□□□□ 0.59
Prom1O54990 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.71■□□□□ 0.59
Prom1O54990 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Prom1O54990 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prom1O54990 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Prom1O54990 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Prom1O54990 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prom1O54990 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.7■□□□□ 0.58
Prom1O54990 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prom1O54990 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.7■□□□□ 0.58
Prom1O54990 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Gm13884-201ENSMUST00000118103 829 ntBASIC18.7■□□□□ 0.58
Prom1O54990 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.7■□□□□ 0.58
Prom1O54990 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.7■□□□□ 0.58
Prom1O54990 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prom1O54990 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.69■□□□□ 0.58
Prom1O54990 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prom1O54990 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Gm44450-201ENSMUST00000199528 114 ntBASIC18.69■□□□□ 0.58
Prom1O54990 Gm43347-201ENSMUST00000200226 580 ntBASIC18.69■□□□□ 0.58
Prom1O54990 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.69■□□□□ 0.58
Prom1O54990 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prom1O54990 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.69■□□□□ 0.58
Prom1O54990 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Prom1O54990 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prom1O54990 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
Prom1O54990 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prom1O54990 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.68■□□□□ 0.58
Prom1O54990 Gm11452-201ENSMUST00000122376 690 ntBASIC18.68■□□□□ 0.58
Prom1O54990 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.68■□□□□ 0.58
Prom1O54990 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms