Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.97■□□□□ 0.15
Abca4O35600 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Abca4O35600 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Abca4O35600 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Abca4O35600 Gm18421-201ENSMUST00000204122 625 ntBASIC15.96■□□□□ 0.15
Abca4O35600 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.96■□□□□ 0.15
Abca4O35600 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Abca4O35600 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.96■□□□□ 0.15
Abca4O35600 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Abca4O35600 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Abca4O35600 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Abca4O35600 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Abca4O35600 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.96■□□□□ 0.15
Abca4O35600 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.96■□□□□ 0.15
Abca4O35600 Gm44430-201ENSMUST00000203376 995 ntBASIC15.96■□□□□ 0.15
Abca4O35600 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Abca4O35600 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Abca4O35600 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Abca4O35600 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Abca4O35600 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Abca4O35600 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Abca4O35600 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.95■□□□□ 0.14
Abca4O35600 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.95■□□□□ 0.14
Abca4O35600 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Abca4O35600 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Gm25745-201ENSMUST00000174945 133 ntBASIC15.95■□□□□ 0.14
Abca4O35600 Gm29791-202ENSMUST00000207888 369 ntBASIC15.95■□□□□ 0.14
Abca4O35600 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Abca4O35600 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Abca4O35600 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.94■□□□□ 0.14
Abca4O35600 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.94■□□□□ 0.14
Abca4O35600 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.94■□□□□ 0.14
Abca4O35600 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Abca4O35600 Gm13186-201ENSMUST00000118031 316 ntBASIC15.94■□□□□ 0.14
Abca4O35600 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Abca4O35600 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Abca4O35600 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Abca4O35600 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Gm11764-201ENSMUST00000120221 623 ntBASIC15.93■□□□□ 0.14
Abca4O35600 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Abca4O35600 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.93■□□□□ 0.14
Abca4O35600 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Abca4O35600 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.93■□□□□ 0.14
Abca4O35600 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Abca4O35600 Mir6977-201ENSMUST00000184960 64 ntBASIC15.93■□□□□ 0.14
Abca4O35600 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.93■□□□□ 0.14
Abca4O35600 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.93■□□□□ 0.14
Abca4O35600 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.93■□□□□ 0.14
Abca4O35600 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Abca4O35600 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Abca4O35600 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms