Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Clcn6O35454 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clcn6O35454 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.13■□□□□ 0.49
Clcn6O35454 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn6O35454 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.13■□□□□ 0.49
Clcn6O35454 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clcn6O35454 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.13■□□□□ 0.49
Clcn6O35454 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.12■□□□□ 0.49
Clcn6O35454 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn6O35454 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Clcn6O35454 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn6O35454 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 Gm22325-201ENSMUST00000158904 308 ntBASIC18.12■□□□□ 0.49
Clcn6O35454 Gm27011-201ENSMUST00000182352 972 ntBASIC18.12■□□□□ 0.49
Clcn6O35454 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.12■□□□□ 0.49
Clcn6O35454 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Clcn6O35454 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 Gm44975-201ENSMUST00000207435 1390 ntBASIC18.12■□□□□ 0.49
Clcn6O35454 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcn6O35454 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn6O35454 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn6O35454 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clcn6O35454 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clcn6O35454 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Clcn6O35454 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clcn6O35454 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC18.11■□□□□ 0.49
Clcn6O35454 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Clcn6O35454 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn6O35454 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.11■□□□□ 0.49
Clcn6O35454 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Clcn6O35454 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn6O35454 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn6O35454 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcn6O35454 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcn6O35454 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Gm38262-201ENSMUST00000194760 1382 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clcn6O35454 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.1■□□□□ 0.49
Clcn6O35454 Gm18595-201ENSMUST00000175736 1068 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Gm8581-201ENSMUST00000188636 890 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Gm36966-201ENSMUST00000192217 413 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Clcn6O35454 Gm8679-201ENSMUST00000210651 1036 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Clcn6O35454 CT009495.1-201ENSMUST00000224221 862 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 AC154245.1-201ENSMUST00000224615 601 ntBASIC18.1■□□□□ 0.49
Clcn6O35454 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn6O35454 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Clcn6O35454 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Gm12441-201ENSMUST00000121806 588 ntBASIC18.09■□□□□ 0.49
Clcn6O35454 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Clcn6O35454 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms