Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.36□□□□□ -0.43
TnxbO35452 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Gm13186-201ENSMUST00000118031 316 ntBASIC12.36□□□□□ -0.43
TnxbO35452 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.36□□□□□ -0.43
TnxbO35452 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TnxbO35452 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnxbO35452 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.35□□□□□ -0.43
TnxbO35452 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Gm43433-201ENSMUST00000196573 481 ntBASIC12.35□□□□□ -0.43
TnxbO35452 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.35□□□□□ -0.43
TnxbO35452 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.35□□□□□ -0.43
TnxbO35452 Phf7-203ENSMUST00000226565 1971 ntBASIC12.35□□□□□ -0.43
TnxbO35452 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC12.35□□□□□ -0.43
TnxbO35452 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TnxbO35452 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.35□□□□□ -0.43
TnxbO35452 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.35□□□□□ -0.43
TnxbO35452 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnxbO35452 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TnxbO35452 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.34□□□□□ -0.43
TnxbO35452 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TnxbO35452 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TnxbO35452 Golph3-205ENSMUST00000228671 2842 ntBASIC12.34□□□□□ -0.43
TnxbO35452 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.34□□□□□ -0.43
TnxbO35452 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.34□□□□□ -0.43
TnxbO35452 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TnxbO35452 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TnxbO35452 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TnxbO35452 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.33□□□□□ -0.44
TnxbO35452 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC12.33□□□□□ -0.44
TnxbO35452 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Mir7085-201ENSMUST00000184353 66 ntBASIC12.33□□□□□ -0.44
TnxbO35452 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.33□□□□□ -0.44
TnxbO35452 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TnxbO35452 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.32□□□□□ -0.44
TnxbO35452 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.32□□□□□ -0.44
TnxbO35452 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.32□□□□□ -0.44
TnxbO35452 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.32□□□□□ -0.44
TnxbO35452 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.32□□□□□ -0.44
TnxbO35452 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.32□□□□□ -0.44
TnxbO35452 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.32□□□□□ -0.44
TnxbO35452 Gm18827-201ENSMUST00000188341 790 ntBASIC12.32□□□□□ -0.44
TnxbO35452 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.32□□□□□ -0.44
TnxbO35452 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TnxbO35452 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.31□□□□□ -0.44
TnxbO35452 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TnxbO35452 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.31□□□□□ -0.44
TnxbO35452 Gm18421-201ENSMUST00000204122 625 ntBASIC12.31□□□□□ -0.44
TnxbO35452 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
TnxbO35452 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TnxbO35452 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms