Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.43□□□□□ -0.1
Prrt1O35449 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Prrt1O35449 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prrt1O35449 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.43□□□□□ -0.1
Prrt1O35449 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Prrt1O35449 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prrt1O35449 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.42□□□□□ -0.1
Prrt1O35449 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Prrt1O35449 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Prrt1O35449 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.42□□□□□ -0.1
Prrt1O35449 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
Prrt1O35449 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prrt1O35449 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.42□□□□□ -0.1
Prrt1O35449 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.41□□□□□ -0.1
Prrt1O35449 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.41□□□□□ -0.1
Prrt1O35449 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Prrt1O35449 Gm13234-201ENSMUST00000120010 747 ntBASIC14.41□□□□□ -0.1
Prrt1O35449 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Gm21956-201ENSMUST00000179946 522 ntBASIC14.41□□□□□ -0.1
Prrt1O35449 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.41□□□□□ -0.1
Prrt1O35449 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prrt1O35449 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prrt1O35449 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.4□□□□□ -0.1
Prrt1O35449 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.4□□□□□ -0.1
Prrt1O35449 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prrt1O35449 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.4□□□□□ -0.1
Prrt1O35449 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Gm38285-201ENSMUST00000192928 922 ntBASIC14.4□□□□□ -0.1
Prrt1O35449 Gm43017-201ENSMUST00000198296 752 ntBASIC14.4□□□□□ -0.1
Prrt1O35449 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Prrt1O35449 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Prrt1O35449 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.4□□□□□ -0.1
Prrt1O35449 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.4□□□□□ -0.1
Prrt1O35449 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prrt1O35449 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Prrt1O35449 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Prrt1O35449 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms