Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Capn1O35350 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.74■□□□□ 0.11
Capn1O35350 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.74■□□□□ 0.11
Capn1O35350 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Gm10418-201ENSMUST00000100943 576 ntBASIC15.74■□□□□ 0.11
Capn1O35350 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Capn1O35350 Gm2274-201ENSMUST00000184539 609 ntBASIC15.74■□□□□ 0.11
Capn1O35350 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Capn1O35350 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Capn1O35350 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Capn1O35350 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Capn1O35350 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.73■□□□□ 0.11
Capn1O35350 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Capn1O35350 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.73■□□□□ 0.11
Capn1O35350 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Capn1O35350 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Capn1O35350 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.73■□□□□ 0.11
Capn1O35350 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Capn1O35350 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Capn1O35350 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.73■□□□□ 0.11
Capn1O35350 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.73■□□□□ 0.11
Capn1O35350 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Capn1O35350 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Capn1O35350 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Capn1O35350 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Capn1O35350 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Gm24841-201ENSMUST00000158676 357 ntBASIC15.72■□□□□ 0.11
Capn1O35350 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Mir5130-201ENSMUST00000175160 84 ntBASIC15.72■□□□□ 0.11
Capn1O35350 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.72■□□□□ 0.11
Capn1O35350 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.72■□□□□ 0.11
Capn1O35350 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Capn1O35350 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Capn1O35350 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Gm10013-201ENSMUST00000106074 672 ntBASIC15.71■□□□□ 0.11
Capn1O35350 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.71■□□□□ 0.11
Capn1O35350 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.71■□□□□ 0.11
Capn1O35350 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.71■□□□□ 0.11
Capn1O35350 Gm23634-201ENSMUST00000175071 91 ntBASIC15.71■□□□□ 0.11
Capn1O35350 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.71■□□□□ 0.11
Capn1O35350 Gm21362-201ENSMUST00000194272 928 ntBASIC15.71■□□□□ 0.11
Capn1O35350 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Capn1O35350 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.71■□□□□ 0.11
Capn1O35350 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.71■□□□□ 0.11
Capn1O35350 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Capn1O35350 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Capn1O35350 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Capn1O35350 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Capn1O35350 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms