Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Hdac1O09106 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Hdac1O09106 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.27■□□□□ 0.84
Hdac1O09106 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hdac1O09106 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac1O09106 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac1O09106 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.27■□□□□ 0.83
Hdac1O09106 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Hdac1O09106 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.27■□□□□ 0.83
Hdac1O09106 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.27■□□□□ 0.83
Hdac1O09106 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.27■□□□□ 0.83
Hdac1O09106 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hdac1O09106 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hdac1O09106 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Gm17661-201ENSMUST00000170317 270 ntBASIC20.26■□□□□ 0.83
Hdac1O09106 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.26■□□□□ 0.83
Hdac1O09106 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hdac1O09106 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac1O09106 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hdac1O09106 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.25■□□□□ 0.83
Hdac1O09106 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hdac1O09106 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hdac1O09106 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.25■□□□□ 0.83
Hdac1O09106 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hdac1O09106 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hdac1O09106 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac1O09106 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.25■□□□□ 0.83
Hdac1O09106 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.24■□□□□ 0.83
Hdac1O09106 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hdac1O09106 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.24■□□□□ 0.83
Hdac1O09106 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.24■□□□□ 0.83
Hdac1O09106 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.24■□□□□ 0.83
Hdac1O09106 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hdac1O09106 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.24■□□□□ 0.83
Hdac1O09106 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac1O09106 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.23■□□□□ 0.83
Hdac1O09106 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.23■□□□□ 0.83
Hdac1O09106 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.23■□□□□ 0.83
Hdac1O09106 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hdac1O09106 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.23■□□□□ 0.83
Hdac1O09106 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Hdac1O09106 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hdac1O09106 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac1O09106 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hdac1O09106 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Hdac1O09106 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac1O09106 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hdac1O09106 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms