Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.78□□□□□ -0.68
Pkd1O08852 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC10.78□□□□□ -0.68
Pkd1O08852 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.78□□□□□ -0.68
Pkd1O08852 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pkd1O08852 AV026068-213ENSMUST00000223675 1171 ntBASIC10.78□□□□□ -0.68
Pkd1O08852 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pkd1O08852 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC10.77□□□□□ -0.68
Pkd1O08852 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pkd1O08852 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pkd1O08852 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.77□□□□□ -0.68
Pkd1O08852 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Pkd1O08852 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pkd1O08852 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.77□□□□□ -0.69
Pkd1O08852 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.77□□□□□ -0.69
Pkd1O08852 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.77□□□□□ -0.69
Pkd1O08852 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm4535-201ENSMUST00000182274 558 ntBASIC10.77□□□□□ -0.69
Pkd1O08852 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Gm10355-201ENSMUST00000097146 517 ntBASIC10.77□□□□□ -0.69
Pkd1O08852 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pkd1O08852 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pkd1O08852 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pkd1O08852 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm24513-201ENSMUST00000174964 138 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pkd1O08852 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm11780-201ENSMUST00000136880 516 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm12260-201ENSMUST00000122447 411 ntBASIC10.76□□□□□ -0.69
Pkd1O08852 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pkd1O08852 Gm6550-201ENSMUST00000187574 993 ntBASIC10.75□□□□□ -0.69
Pkd1O08852 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.75□□□□□ -0.69
Pkd1O08852 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.75□□□□□ -0.69
Pkd1O08852 Iqck-206ENSMUST00000208658 2891 ntBASIC10.75□□□□□ -0.69
Pkd1O08852 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.75□□□□□ -0.69
Pkd1O08852 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.75□□□□□ -0.69
Pkd1O08852 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pkd1O08852 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Pkd1O08852 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pkd1O08852 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.75□□□□□ -0.69
Pkd1O08852 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms