Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.21■□□□□ 0.19
Sh3yl1O08641 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Gm3375-201ENSMUST00000203929 796 ntBASIC16.21■□□□□ 0.19
Sh3yl1O08641 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3yl1O08641 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3yl1O08641 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3yl1O08641 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sh3yl1O08641 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Sh3yl1O08641 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh3yl1O08641 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.19■□□□□ 0.18
Sh3yl1O08641 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.19■□□□□ 0.18
Sh3yl1O08641 Odf3b-204ENSMUST00000227834 930 ntBASIC16.19■□□□□ 0.18
Sh3yl1O08641 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3yl1O08641 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh3yl1O08641 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.18■□□□□ 0.18
Sh3yl1O08641 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Gm30025-201ENSMUST00000218555 728 ntBASIC16.18■□□□□ 0.18
Sh3yl1O08641 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3yl1O08641 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.17■□□□□ 0.18
Sh3yl1O08641 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms