Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Raet1aO08602 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.08■□□□□ 0
Raet1aO08602 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.08■□□□□ 0
Raet1aO08602 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.07■□□□□ 0
Raet1aO08602 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.07■□□□□ 0
Raet1aO08602 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raet1aO08602 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1aO08602 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.07■□□□□ 0
Raet1aO08602 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.07■□□□□ 0
Raet1aO08602 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1aO08602 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raet1aO08602 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.07■□□□□ 0
Raet1aO08602 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1aO08602 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1aO08602 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.06■□□□□ 0
Raet1aO08602 Odf3b-204ENSMUST00000227834 930 ntBASIC15.06■□□□□ 0
Raet1aO08602 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1aO08602 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1aO08602 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.05■□□□□ 0
Raet1aO08602 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1aO08602 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1aO08602 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1aO08602 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1aO08602 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.05■□□□□ -0
Raet1aO08602 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Gm3375-201ENSMUST00000203929 796 ntBASIC15.05■□□□□ -0
Raet1aO08602 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.05■□□□□ -0
Raet1aO08602 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.05■□□□□ -0
Raet1aO08602 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1aO08602 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Raet1aO08602 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Raet1aO08602 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Raet1aO08602 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.04■□□□□ -0
Raet1aO08602 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.04■□□□□ -0
Raet1aO08602 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.04■□□□□ -0
Raet1aO08602 Mir5122-201ENSMUST00000175004 89 ntBASIC15.04■□□□□ -0
Raet1aO08602 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.04■□□□□ -0
Raet1aO08602 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.04■□□□□ -0
Raet1aO08602 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
Raet1aO08602 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1aO08602 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms