Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-3J3QMG8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-3J3QMG8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-3J3QMG8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-3J3QMG8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13d-3J3QMG8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-3J3QMG8 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Gm5417-201ENSMUST00000079706 384 ntBASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-3J3QMG8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Gm27000-201ENSMUST00000182943 842 ntBASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-3J3QMG8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms