Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh9F8VPK8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Gm43183-201ENSMUST00000200632 547 ntBASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh9F8VPK8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh9F8VPK8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh9F8VPK8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Gm13168-201ENSMUST00000121771 632 ntBASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Gm27011-201ENSMUST00000182352 972 ntBASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh9F8VPK8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh9F8VPK8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh9F8VPK8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.39■□□□□ 0.38
Pcdh9F8VPK8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh9F8VPK8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms