Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh11xF6ZNL5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Gm6433-201ENSMUST00000118634 875 ntBASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh11xF6ZNL5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh11xF6ZNL5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh11xF6ZNL5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh11xF6ZNL5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh11xF6ZNL5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh11xF6ZNL5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Gm30025-201ENSMUST00000218555 728 ntBASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh11xF6ZNL5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Gm43799-201ENSMUST00000201845 579 ntBASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Gm9987-201ENSMUST00000069768 567 ntBASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms