Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc188F6WEU2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc188F6WEU2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.34
Ccdc188F6WEU2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Gm11424-201ENSMUST00000121929 829 ntBASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Mir8117-201ENSMUST00000184773 107 ntBASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc188F6WEU2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Tgds-204ENSMUST00000228543 1594 ntBASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc188F6WEU2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc188F6WEU2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc188F6WEU2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm44450-201ENSMUST00000199528 114 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc188F6WEU2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc188F6WEU2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc188F6WEU2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc188F6WEU2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms