Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.46■□□□□ 0.39
Atf6F6VAN0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Atf6F6VAN0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Atf6F6VAN0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.45■□□□□ 0.38
Atf6F6VAN0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Timm23-208ENSMUST00000226683 750 ntBASIC17.45■□□□□ 0.38
Atf6F6VAN0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.45■□□□□ 0.38
Atf6F6VAN0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6F6VAN0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.44■□□□□ 0.38
Atf6F6VAN0 Gm9731-201ENSMUST00000209480 747 ntBASIC17.44■□□□□ 0.38
Atf6F6VAN0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.44■□□□□ 0.38
Atf6F6VAN0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.44■□□□□ 0.38
Atf6F6VAN0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Atf6F6VAN0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.43■□□□□ 0.38
Atf6F6VAN0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6F6VAN0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.42■□□□□ 0.38
Atf6F6VAN0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.42■□□□□ 0.38
Atf6F6VAN0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6F6VAN0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6F6VAN0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms