Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.03■□□□□ 0.32
Col6a3E9PWQ3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.03■□□□□ 0.32
Col6a3E9PWQ3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a3E9PWQ3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.03■□□□□ 0.32
Col6a3E9PWQ3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a3E9PWQ3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a3E9PWQ3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a3E9PWQ3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col6a3E9PWQ3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm44335-201ENSMUST00000196879 141 ntBASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm44297-201ENSMUST00000198304 141 ntBASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm44346-201ENSMUST00000198851 141 ntBASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Col6a3E9PWQ3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a3E9PWQ3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms