Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Rfx8D3YU81 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.03■□□□□ 0.48
Rfx8D3YU81 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rfx8D3YU81 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Gm30025-201ENSMUST00000218555 728 ntBASIC18.02■□□□□ 0.48
Rfx8D3YU81 Il3ra-202ENSMUST00000223589 738 ntBASIC18.02■□□□□ 0.48
Rfx8D3YU81 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rfx8D3YU81 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Rfx8D3YU81 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx8D3YU81 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rfx8D3YU81 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx8D3YU81 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx8D3YU81 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.02■□□□□ 0.47
Rfx8D3YU81 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.01■□□□□ 0.47
Rfx8D3YU81 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx8D3YU81 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Rfx8D3YU81 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rfx8D3YU81 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18■□□□□ 0.47
Rfx8D3YU81 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rfx8D3YU81 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18■□□□□ 0.47
Rfx8D3YU81 Mir6982-201ENSMUST00000184354 68 ntBASIC18■□□□□ 0.47
Rfx8D3YU81 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx8D3YU81 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx8D3YU81 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.98■□□□□ 0.47
Rfx8D3YU81 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rfx8D3YU81 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx8D3YU81 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms