Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm12887B1AVM1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Gm12887B1AVM1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gm12887B1AVM1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Gm38285-201ENSMUST00000192928 922 ntBASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm12887B1AVM1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm12887B1AVM1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms