Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.51■□□□□ 0.39
Col4a6B1AVK5 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Gm6376-201ENSMUST00000209407 580 ntBASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a6B1AVK5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Gm4995-201ENSMUST00000117247 432 ntBASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a6B1AVK5 Gm11779-201ENSMUST00000118541 368 ntBASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a6B1AVK5 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.47■□□□□ 0.39
Col4a6B1AVK5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a6B1AVK5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a6B1AVK5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a6B1AVK5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a6B1AVK5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms