Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4bA6X942 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Gm29518-201ENSMUST00000190858 372 ntBASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4bA6X942 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Fst-202ENSMUST00000223640 2612 ntBASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4bA6X942 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.17■□□□□ 0.5
Sh2d4bA6X942 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Mir1668-201ENSMUST00000184114 107 ntBASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh2d4bA6X942 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms