Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.84□□□□□ -0.35
Col6a5A6H584 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a5A6H584 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a5A6H584 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a5A6H584 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a5A6H584 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Gm27494-201ENSMUST00000184735 189 ntBASIC12.83□□□□□ -0.36
Col6a5A6H584 Mir8117-201ENSMUST00000184773 107 ntBASIC12.83□□□□□ -0.36
Col6a5A6H584 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.83□□□□□ -0.36
Col6a5A6H584 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a5A6H584 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a5A6H584 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a5A6H584 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.82□□□□□ -0.36
Col6a5A6H584 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.82□□□□□ -0.36
Col6a5A6H584 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a5A6H584 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.82□□□□□ -0.36
Col6a5A6H584 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.81□□□□□ -0.36
Col6a5A6H584 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.81□□□□□ -0.36
Col6a5A6H584 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.81□□□□□ -0.36
Col6a5A6H584 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a5A6H584 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a5A6H584 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a5A6H584 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.81□□□□□ -0.36
Col6a5A6H584 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a5A6H584 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a5A6H584 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a5A6H584 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Col6a5A6H584 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Col6a5A6H584 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col6a5A6H584 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a5A6H584 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Gm14127-201ENSMUST00000117906 678 ntBASIC12.8□□□□□ -0.36
Col6a5A6H584 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a5A6H584 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.8□□□□□ -0.36
Col6a5A6H584 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a5A6H584 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms