Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt28A6BLY7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Krt28A6BLY7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.83■□□□□ 0.61
Krt28A6BLY7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.83■□□□□ 0.61
Krt28A6BLY7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt28A6BLY7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.83■□□□□ 0.61
Krt28A6BLY7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.83■□□□□ 0.61
Krt28A6BLY7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Krt28A6BLY7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.82■□□□□ 0.6
Krt28A6BLY7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Fst-202ENSMUST00000223640 2612 ntBASIC18.82■□□□□ 0.6
Krt28A6BLY7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Gm43575-201ENSMUST00000196420 516 ntBASIC18.82■□□□□ 0.6
Krt28A6BLY7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.82■□□□□ 0.6
Krt28A6BLY7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Krt28A6BLY7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Gm15467-201ENSMUST00000120582 445 ntBASIC18.81■□□□□ 0.6
Krt28A6BLY7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Krt28A6BLY7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt28A6BLY7 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.81■□□□□ 0.6
Krt28A6BLY7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Mir5126-201ENSMUST00000175513 77 ntBASIC18.8■□□□□ 0.6
Krt28A6BLY7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt28A6BLY7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.8■□□□□ 0.6
Krt28A6BLY7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt28A6BLY7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt28A6BLY7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms