Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.3□□□□□ -0.12
Col6a4A2AX52 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Idnk-204ENSMUST00000226010 1898 ntBASIC14.29□□□□□ -0.12
Col6a4A2AX52 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gm5264-201ENSMUST00000190584 848 ntBASIC14.29□□□□□ -0.12
Col6a4A2AX52 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gm13884-201ENSMUST00000118103 829 ntBASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a4A2AX52 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Gm12644-201ENSMUST00000119935 606 ntBASIC14.28□□□□□ -0.12
Col6a4A2AX52 Gm11594-201ENSMUST00000122313 162 ntBASIC14.28□□□□□ -0.12
Col6a4A2AX52 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Gm6376-201ENSMUST00000209407 580 ntBASIC14.28□□□□□ -0.12
Col6a4A2AX52 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.28□□□□□ -0.12
Col6a4A2AX52 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a4A2AX52 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a4A2AX52 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a4A2AX52 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44357-201ENSMUST00000195897 142 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm19658-201ENSMUST00000196231 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44367-201ENSMUST00000196836 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44350-201ENSMUST00000197197 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44390-201ENSMUST00000197533 144 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44313-201ENSMUST00000198018 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44486-201ENSMUST00000198508 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44454-201ENSMUST00000198541 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44314-201ENSMUST00000199263 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44394-201ENSMUST00000199558 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44484-201ENSMUST00000199873 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44466-201ENSMUST00000200264 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm44359-201ENSMUST00000200671 138 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Gm15372-201ENSMUST00000120729 834 ntBASIC14.26□□□□□ -0.13
Col6a4A2AX52 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a4A2AX52 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms