Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm13223-201ENSMUST00000118609 747 ntBASIC8.97□□□□□ -0.97
Ubr4A2AN08 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC8.97□□□□□ -0.97
Ubr4A2AN08 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm18889-201ENSMUST00000174284 929 ntBASIC8.96□□□□□ -0.97
Ubr4A2AN08 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm11336-201ENSMUST00000118168 334 ntBASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm4959-201ENSMUST00000197271 1044 ntBASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Ubr4A2AN08 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm45784-201ENSMUST00000188360 142 ntBASIC8.96□□□□□ -0.98
Ubr4A2AN08 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm4993-201ENSMUST00000118719 1174 ntBASIC8.96□□□□□ -0.98
Ubr4A2AN08 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Gm9257-201ENSMUST00000221254 232 ntBASIC8.96□□□□□ -0.98
Ubr4A2AN08 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ubr4A2AN08 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm12504-201ENSMUST00000120860 2231 ntBASIC8.95□□□□□ -0.98
Ubr4A2AN08 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm13332-201ENSMUST00000120451 1398 ntBASIC8.95□□□□□ -0.98
Ubr4A2AN08 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC8.95□□□□□ -0.98
Ubr4A2AN08 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ubr4A2AN08 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ubr4A2AN08 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms