Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm5253-201ENSMUST00000187104 1025 ntBASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Gm7506-201ENSMUST00000207758 815 ntBASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Shroom2A2ALU4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom2A2ALU4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Gm7229-201ENSMUST00000214719 1007 ntBASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom2A2ALU4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Shroom2A2ALU4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom2A2ALU4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Shroom2A2ALU4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Gm37500-201ENSMUST00000192059 1443 ntBASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Gm37374-201ENSMUST00000194954 1829 ntBASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC26.82■■□□□ 1.88
Shroom2A2ALU4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom2A2ALU4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms