Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12d-1A0N8R0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-1A0N8R0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Mir5133-201ENSMUST00000174955 77 ntBASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Gm4968-201ENSMUST00000071458 858 ntBASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-1A0N8R0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Gm2559-201ENSMUST00000201323 363 ntBASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-1A0N8R0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Gm26571-201ENSMUST00000181399 666 ntBASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-1A0N8R0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Gm42569-201ENSMUST00000200539 472 ntBASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms