Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm37025-201ENSMUST00000195159 829 ntBASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-2A0A140T8N6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm38027-201ENSMUST00000192315 235 ntBASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv13-2A0A140T8N6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-2A0A140T8N6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-2A0A140T8N6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv13-2A0A140T8N6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-2A0A140T8N6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms