Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm29791-202ENSMUST00000207888 369 ntBASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm10033-202ENSMUST00000211874 928 ntBASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv1-88A0A140T8N1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm5874-201ENSMUST00000096101 508 ntBASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv1-88A0A140T8N1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 AV356131-201ENSMUST00000206201 750 ntBASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Igkv1-88A0A140T8N1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms