Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Zfp783-201ENSMUST00000095946 670 ntBASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-4A0A0G2JG01 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-4A0A0G2JG01 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm15375-201ENSMUST00000119510 849 ntBASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm10231-201ENSMUST00000181584 441 ntBASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm10175-202ENSMUST00000208752 441 ntBASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm18025-201ENSMUST00000221733 862 ntBASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms