Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm7889-201ENSMUST00000185591 958 ntBASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atg4a-psA0A0G2JFS9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.64■□□□□ 0.9
Atg4a-psA0A0G2JFS9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atg4a-psA0A0G2JFS9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm2274-201ENSMUST00000184539 609 ntBASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm13216-201ENSMUST00000117145 591 ntBASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.61■□□□□ 0.89
Atg4a-psA0A0G2JFS9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms