Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm13234-201ENSMUST00000120010 747 ntBASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Reep4-203ENSMUST00000226563 1444 ntBASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.9□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3n-3A0A0G2JEM0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms