Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm7638-201ENSMUST00000121348 967 ntBASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm9731-201ENSMUST00000209480 747 ntBASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv30A0A0B4J1P1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv30A0A0B4J1P1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv30A0A0B4J1P1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv30A0A0B4J1P1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm17661-201ENSMUST00000170317 270 ntBASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm10252-201ENSMUST00000209541 832 ntBASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm30025-201ENSMUST00000218555 728 ntBASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv30A0A0B4J1P1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.81□□□□□ -0.36
Trbv30A0A0B4J1P1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms