Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv3A0A0A6YYE2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trbv3A0A0A6YYE2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm13234-201ENSMUST00000120010 747 ntBASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm13401-201ENSMUST00000117074 291 ntBASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm21956-201ENSMUST00000179946 522 ntBASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm13241-201ENSMUST00000094493 780 ntBASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trbv3A0A0A6YYE2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trbv3A0A0A6YYE2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms