Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv21A0A0A6YX06 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Gm7791-201ENSMUST00000219066 539 ntBASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv21A0A0A6YX06 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Mir5122-201ENSMUST00000175004 89 ntBASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv21A0A0A6YX06 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Haglr-201ENSMUST00000100000 2085 ntBASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv21A0A0A6YX06 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv21A0A0A6YX06 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms