Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm37856-201ENSMUST00000191634 999 ntBASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav21-dv12A0A075B6C4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav21-dv12A0A075B6C4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms