Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-4A0A075B6B4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm10252-201ENSMUST00000209541 832 ntBASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm30025-201ENSMUST00000218555 728 ntBASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-4A0A075B6B4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-4A0A075B6B4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trav6-4A0A075B6B4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Trav6-4A0A075B6B4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Il3ra-202ENSMUST00000223589 738 ntBASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-4A0A075B6B4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms