Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm13216-201ENSMUST00000117145 591 ntBASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Mir6982-201ENSMUST00000184354 68 ntBASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6d-7A0A075B6B0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-7A0A075B6B0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6d-7A0A075B6B0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Zfp783-201ENSMUST00000095946 670 ntBASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6d-7A0A075B6B0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Mir8112-201ENSMUST00000184382 131 ntBASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav6d-7A0A075B6B0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms