Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-1A0A075B699 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.15□□□□□ -0.31
Trav9d-1A0A075B699 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav9d-1A0A075B699 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-1A0A075B699 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Gm13158-201ENSMUST00000122007 736 ntBASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Gm42545-201ENSMUST00000202755 922 ntBASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-1A0A075B699 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-1A0A075B699 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms